fcs_parser.cpp File Reference

#include "fcs_parser.h"
#include <algorithm>
#include <cstddef>
#include <filesystem>
#include <fstream>
#include <iomanip>
#include <random>
#include <regex>
#include <sstream>
#include <string>

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Functions
static size_t	parse_id (const std::string &word)
	Helper function for parsing ID from string. More...
static void	parse_info (std::ifstream &handle, size_t &data_begin_offset, size_t &data_end_offset, size_t &params_count, size_t &events_count, bool &is_be, std::vector< std::string > &params_names)
	Parses info from FCS header. More...
static void	parse_data (std::ifstream &handle, size_t data_begin_offset, size_t data_end_offset, size_t params_count, size_t &events_count, bool is_be, std::vector< float > &out_data)
	Parses actual data from the FCS file. More...
void	parse_FCS (const std::string &filename, DataModel &dm)
	Parses FCS file and fills DataModel data. More...

Function Documentation

parse_data()

static void parse_data ( std::ifstream &  handle, size_t  data_begin_offset, size_t  data_end_offset, size_t  params_count, size_t &  events_count, bool  is_be, std::vector< float > &  out_data  )

static

Parses actual data from the FCS file.

Parameters

[in]	handle
[in]	data_begin_offset
[in]	data_end_offset
[in]	params_count
[in]	events_count
[in]	is_be
[out]	out_data

Definition at line 146 of file fcs_parser.cpp.

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parse_FCS()

void parse_FCS	(	const std::string &	file_path,
		DataModel &	dm
	)

Parses FCS file and fills DataModel data.

Parameters

[in]	file_path	File path to the FCS file.
[out]	dm	DataModel instance filled by data from parsed FCS file.

Exceptions

std::domain_error

Throws when the file cannot be opened.

Definition at line 190 of file fcs_parser.cpp.

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parse_id()

static size_t parse_id ( const std::string &  word )

static

Helper function for parsing ID from string.

Definition at line 34 of file fcs_parser.cpp.

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parse_info()

static void parse_info ( std::ifstream &  handle, size_t &  data_begin_offset, size_t &  data_end_offset, size_t &  params_count, size_t &  events_count, bool &  is_be, std::vector< std::string > &  params_names  )

static

Parses info from FCS header.

Parameters

[in]	handle
[out]	data_begin_offset
[out]	data_end_offset
[out]	params_count
[out]	events_count
[out]	is_be
[out]	params_names

Definition at line 59 of file fcs_parser.cpp.

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